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The GCG program
typedata
displays database entries on the screen. The entry specification must
be
provided as
database:name
or
database:accessionnumber
e.g.,
% typedata -ref
The
GCG program fetch copies any (GCG) data on disk
to your current directory.
You can specify data files or database
entries. The entry specification must be provided as
database:name
or
database:accessionnumber
e.g.,
% fetch
genembl:pbr322 (EMBL)
genembl:synblue (Genbank)
Note that the entry name or accession number must be determined
in advance via any
of the methods described above
If you
want to view annotation data on the screen, use the command line qualifier "ref":
FETCH copies GCG sequences or data files from the GCG database into
your directory or displays them on your terminal screen.
FETCH what sequence(s) ? genembl:pbr322
pbr322_ref
PBR322 - Plasmid pBR322 complete sequence
ID PBR322 standard DNA SYN 4363 BP.
XX
AC V01119
XX
...
The programs 'gopher' and
WWW allow you to view
database entries in a very convenient fashion. See the corresponding
sections below for details.
Subsection 6.3.2 Copy Data to Your Directory
genembl:pbr322 (EMBL)
genembl:synblue (Genbank)
Note that the entry name or accession number must be determined
in advance via any
of the methods described above.
The dialogue on the screen is as follows:
FETCH copies GCG sequences or data files from the GCG database
into your directory or displays them on your terminal screen.
FETCH what sequence(s) ? genembl:pbr322
pbr322.syn
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